dcm4che - Creation of multi-frame dicom image using DCM4CHE3(JAVA) -


i trying create multiframe dicom file multiple jpeg file writing them using imagewriter writer.canwritesequence() giving false not able write jpeg file multiframe dicom file there way can create multiframe dicom file jpeg image or bufferedimage

 public attributes createdicomheader(bufferedimage sampleframe, int numberofframes) {          // image information sample image:         // frames should have same information once.       int colorcomponents = sampleframe.getcolormodel().getnumcolorcomponents();         int bitsperpixel = sampleframe.getcolormodel().getpixelsize();         int bitsallocated = (bitsperpixel / colorcomponents);         int samplesperpixel = colorcomponents;          // dicom object hold our frames         attributes dicom = new attributes();          // add patient related information dicom dataset         dicom.getstring(tag.patientname, "aditya^g");         dicom.getstring(tag.patientid, "1234id");         dicom.getdate(tag.patientbirthdate, new java.util.date());         dicom.getstring(tag.patientsex, "m");          // add study related information dicom dataset         dicom.getstring(tag.accessionnumber, "1234ac");         dicom.getstring(tag.studyid, "1");         dicom.getstring(tag.studydescription, "multiframe study");         dicom.setdate(tag.studydate, new java.util.date());         dicom.setdate(tag.studytime, new java.util.date());          // add series related information dicom dataset         dicom.setint(tag.seriesnumber,vr.us, 1);         dicom.setdate(tag.seriesdate, new java.util.date());         dicom.setdate(tag.seriestime, new java.util.date());         dicom.getstring(tag.seriesdescription, "multiframe series");         dicom.getstring(tag.modality, "sc"); // secondary capture          // add image related information dicom dataset         dicom.setint(tag.instancenumber, vr.us, 1);         dicom.setint(tag.samplesperpixel, vr.us, samplesperpixel);         dicom.setstring(tag.photometricinterpretation, vr.cs, "ybr_full_422");         dicom.setint(tag.rows, vr.us, sampleframe.getheight());         dicom.setint(tag.columns, vr.us, sampleframe.getwidth());         dicom.setint(tag.bitsallocated, vr.us, bitsallocated);         dicom.setint(tag.bitsstored, vr.us, bitsallocated);         dicom.setint(tag.highbit, vr.us, bitsallocated-1);         dicom.setint(tag.pixelrepresentation, vr.us, 0);          // add unique identifiers         dicom.setstring(tag.sopclassuid, vr.ui, uid.secondarycaptureimagestorage);         dicom.setstring(tag.studyinstanceuid, vr.ui, uidutils.createuid());         dicom.setstring(tag.seriesinstanceuid, vr.ui, uidutils.createuid());         dicom.setstring(tag.sopinstanceuid, vr.ui, uidutils.createuid());          //start of multiframe information:         dicom.setint(tag.starttrim, vr.us, 1);                            dicom.setint(tag.stoptrim, vr.us, numberofframes);              dicom.getstring(tag.frametime, 0, "33.33");                  dicom.getstring(tag.framedelay, "0.0");                    dicom.setint(tag.numberofframes, vr.us, numberofframes); // number of frames         dicom.setint(tag.recommendeddisplayframerate, vr.us, 3);           dicom.setint(tag.frameincrementpointer, vr.us, tag.frametime);         //end of multiframe information.          // add default character set         dicom.setstring(tag.specificcharacterset, vr.cs, "iso_ir 100");          // init meta information jpeg lossless transfer syntax         dicom.createfilemetainformation(uid.jpegbaseline1);          return dicom;     }        public void encodemultiframe(file[] frames, file dest)       throws ioexception {         // status message         system.out.println("creating multiframe file...");          // create dicom image writer instance , set output          imagereadparam dicomr=new dicomimagereadparam();         imagewriter writer =  imagewriterfactory.getimagewriter(imagewriterfactory.getimagewriterparam(uid.jpegbaseline1));          fileimageoutputstream output = new fileimageoutputstream(dest);         writer.setoutput(output);          // image sample array of images         bufferedimage sample = imageio.read(frames[0]);          // create new dataset (header/metadata) our dicom image writer         attributes ds = this.createdicomheader(sample, frames.length);         attributes fmi = ds.createfilemetainformation(uid.jpegbaseline1);         // set metadata our dicom image writer , prepare encode multiframe sequence      //  imagewriteparam iwp= writer.getdefaultwriteparam() ;        dicommetadata writemeta = new dicommetadata(fmi, ds);         writemeta.getattributes().addall(ds);          if(writer.canwritesequence())         writer.preparewritesequence(writemeta);          else             system.out.println("can not write sequence");           // dicommetadata writemeta = (dicommetadata) writer.getdefaultstreammetadata(null);      //   writemeta.getattributes().addall(ds);      //   writer.preparewritesequence(writemeta);                // status message         system.out.println("start of write sequence...");          // each extracted jpeg images...         (int = 0; < frames.length; i++) {              // status message             system.out.println("encoding frame # "+ (i+1));              // read jpeg file bufferedimage object             bufferedimage frame = imageio.read(frames[i]);              // create new iioimage saved dicom multiframe sequence             iioimage iioimage = new iioimage(frame, null, null);              // write our image dicom multiframe sequence             writer.writetosequence(iioimage, null);         }          // status message         system.out.println("end of write sequence.");          // our multiframe file created. end sequence , close output stream.         writer.endwritesequence();         output.close();          // status message         system.out.println("multiframe file created.");     }  /**  * @param args  * @throws ioexception   */ public static void main(string[] args) throws ioexception {     multiframeimagecreation mf=new multiframeimagecreation();       file[] frames = new file("/root/desktop/multi").listfiles();      // create dicom multiframe file     mf.encodemultiframe(frames, new file("/root/desktop/multiframe.dcm"));  }

}

try use code

import java.awt.image.bufferedimage; import java.io.file; import java.io.ioexception;  import javax.imageio.iioimage; import javax.imageio.imageio; import javax.imageio.imagewriter; import javax.imageio.stream.fileimageoutputstream;  import org.dcm4che2.data.basicdicomobject; import org.dcm4che2.data.dicomobject; import org.dcm4che2.data.tag; import org.dcm4che2.data.uid; import org.dcm4che2.data.vr; import org.dcm4che2.imageio.plugins.dcm.dicomstreammetadata; import org.dcm4che2.imageioimpl.plugins.dcm.dicomimagewriterspi; import org.dcm4che2.util.uidutils;  public class mpeg2dicom {      public mpeg2dicom() {      }      public dicomobject createdicomheader(bufferedimage sampleframe, int numberofframes) {         int colorcomponents = sampleframe.getcolormodel().getnumcolorcomponents();         int bitsperpixel = sampleframe.getcolormodel().getpixelsize();         int bitsallocated = (bitsperpixel / colorcomponents);         int samplesperpixel = colorcomponents;         // dicom object hold our frames         dicomobject dicom = new basicdicomobject();         // add patient related information dicom dataset         dicom.putstring(tag.patientname, null, "patient name");         dicom.putstring(tag.patientid, null, "1234id");         dicom.putdate(tag.patientbirthdate, null, new java.util.date());         dicom.putstring(tag.patientsex, null, "m");         // add study related information dicom dataset         dicom.putstring(tag.accessionnumber, null, "1234ac");         dicom.putstring(tag.studyid, null, "1");         dicom.putstring(tag.studydescription, null, "multiframe study");         dicom.putdate(tag.studydate, null, new java.util.date());         dicom.putdate(tag.studytime, null, new java.util.date());         // add series related information dicom dataset         dicom.putint(tag.seriesnumber, null, 1);         dicom.putdate(tag.seriesdate, null, new java.util.date());         dicom.putdate(tag.seriestime, null, new java.util.date());         dicom.putstring(tag.seriesdescription, null, "multiframe series");         dicom.putstring(tag.modality, null, "sc"); // secondary capture         // add image related information dicom dataset         dicom.putint(tag.instancenumber, null, 1);         dicom.putint(tag.samplesperpixel, null, samplesperpixel);         dicom.putstring(tag.photometricinterpretation, vr.cs, "ybr_full_422");         dicom.putint(tag.rows, null, sampleframe.getheight());         dicom.putint(tag.columns, null, sampleframe.getwidth());         dicom.putint(tag.bitsallocated, null, bitsallocated);         dicom.putint(tag.bitsstored, null, bitsallocated);         dicom.putint(tag.highbit, null, bitsallocated-1);         dicom.putint(tag.pixelrepresentation, null, 0);        // add unique identifiers         dicom.putstring(tag.sopclassuid, null, uid.secondarycaptureimagestorage);         dicom.putstring(tag.studyinstanceuid, null, uidutils.createuid());         dicom.putstring(tag.seriesinstanceuid, null, uidutils.createuid());         dicom.putstring(tag.sopinstanceuid, vr.ui, uidutils.createuid());         //start of multiframe information:         dicom.putint(tag.starttrim, null, 1);                   // start @ frame 1         dicom.putint(tag.stoptrim, null, numberofframes);       // stop @ frame n         dicom.putstring(tag.frametime, null, "33.33");          // milliseconds (30 frames per second)         dicom.putstring(tag.framedelay, null, "0.0");           // no frame dalay         dicom.putint(tag.numberofframes, null, numberofframes); // number of frames         dicom.putint(tag.recommendeddisplayframerate, null, 3);          dicom.putint(tag.frameincrementpointer, null, tag.frametime);         //end of multiframe information.         // add default character set         dicom.putstring(tag.specificcharacterset, vr.cs, "iso_ir 100");         // init meta information jpeg lossless transfer syntax        // dicom.initfilemetainformation(uid.jpeglossless);         dicom.initfilemetainformation(uid.jpegbaseline1);         return dicom;     }        public void encodemultiframe(file[] frames, file dest) throws ioexception {         // status message         system.out.println("creating multiframe file...");         // create dicom image writer instance , set output         imagewriter writer = new dicomimagewriterspi().createwriterinstance();         fileimageoutputstream output = new fileimageoutputstream(dest);         writer.setoutput(output);         // image sample array of images         bufferedimage sample = imageio.read(frames[0]);         // create new dataset (header/metadata) our dicom image writer         dicomobject ds = this.createdicomheader(sample, frames.length);         // set metadata our dicom image writer , prepare encode multiframe sequence         dicomstreammetadata writemeta = (dicomstreammetadata) writer.getdefaultstreammetadata(null);         writemeta.setdicomobject(ds);         writer.preparewritesequence(writemeta);          system.out.println("start of write sequence...");          (int = 0; < frames.length; i++) {             // status message             system.out.println("encoding frame # "+ (i+1));             // read png file bufferedimage object             bufferedimage frame = imageio.read(frames[i]);             // create new iioimage saved dicom multiframe sequence             iioimage iioimage = new iioimage(frame, null, null);             // write our image dicom multiframe sequence             writer.writetosequence(iioimage, null);         }         // status message         system.out.println("end of write sequence.");         // our multiframe file created. end sequence , close output stream.         writer.endwritesequence();         output.close();         // status message         system.out.println("multiframe file created.");     }      public static void main(string[] args) {          try {             // create instance of our class             mpeg2dicom f = new mpeg2dicom();              // create array of files extracted ffmpeg images             file[] frames = new file("d://aaa").listfiles();              // create dicom multiframe file             f.encodemultiframe(frames, new file("d:///multiframe.dcm"));          } catch (exception e) {             // print exceptions             e.printstacktrace();         }     } }

before run code please install java advanced imaging image i/o tools 32 bit version 1.0_01 java advanced imaging image , try run code using java 32 bit version

  • a) jai imageio library not installed;
  • b) jai imageio installed has no values set in path environment variable;
  • c) dll files jai native code cannot found (wrong installation);
  • d) windows 64bits (it work win32);

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