r - how to ensure libsbml.pc is in PKG_CONFIG_PATH -


i'm trying install biggr bioconductor package. got following errors, i'm unable resolve:

could not detect libsbml (>= 3.0) via pkg-config. rsbml requires libsbml http://www.sbml.org/software/libsbml/. please ensure libsbml.pc in pkg_config_path. failed find parsemessage.h indicating libsbml 2.x  not installed. specify include path manually use --with-libsbml-include or libsbml_include.

please me out.

thanks you

kiran

whole script:

bioclite("biggr")     bioc_mirror: https://bioconductor.org     using bioconductor 3.4 (biocinstaller 1.24.0), r 3.3.2 (2016-10-31). installing package(s) ‘biggr’ installing dependency ‘rsbml’  trying url 'https://bioconductor.org/packages/3.4/bioc/src/contrib/rsbml_2.32.0.tar.gz' content type 'application/x-gzip' length 634510 bytes (619 kb) ================================================== downloaded 619 kb  trying url 'https://bioconductor.org/packages/3.4/bioc/src/contrib/biggr_1.10.0.tar.gz' content type 'application/x-gzip' length 4440313 bytes (4.2 mb) ================================================== downloaded 4.2 mb  * installing *source* package ‘rsbml’ ... checking pkg-config... /usr/bin/pkg-config checking pkg-config @ least version 0.9.0... yes checking libsbml3... no checking gcc... gcc -std=gnu99 checking whether c compiler works... yes checking c compiler default output file name... a.out checking suffix of executables...  checking whether cross compiling... no checking suffix of object files... o checking whether using gnu c compiler... yes checking whether gcc -std=gnu99 accepts -g... yes checking gcc -std=gnu99 option accept iso c89... none needed checking how run c preprocessor... gcc -std=gnu99 -e checking grep handles long lines , -e... /bin/grep checking egrep... /bin/grep -e checking ansi c header files... yes checking sys/types.h... yes checking sys/stat.h... yes checking stdlib.h... yes checking string.h... yes checking memory.h... yes checking strings.h... yes checking inttypes.h... yes checking stdint.h... yes checking unistd.h... yes checking sbml/xml/parsemessage.h usability... no checking sbml/xml/parsemessage.h presence... no checking sbml/xml/parsemessage.h... no configure: error: not detect libsbml (>= 3.0) via pkg-config. rsbml requires libsbml http://www.sbml.org/software/libsbml/. please ensure libsbml.pc in pkg_config_path. failed find parsemessage.h indicating libsbml 2.x not installed. specify include path manually use --with-libsbml-include or libsbml_include. error: configuration failed package ‘rsbml’ * removing ‘/home/jst/r/i686-pc-linux-gnu-library/3.3/rsbml’ error: dependency ‘rsbml’ not available package ‘biggr’ * removing ‘/home/jst/r/i686-pc-linux-gnu-library/3.3/biggr’  downloaded source packages in  ‘/tmp/rtmph0jqlv/downloaded_packages’     warning messages:     1: in install.packages(pkgs = doing, lib = lib, ...) :     installation of package ‘rsbml’ had non-zero exit status 2: in install.packages(pkgs = doing, lib = lib, ...) :

installation of package ‘biggr’ had non-zero exit status


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